Robert Cudmore

Sliding Z Projection (FIJI Python Script)

This is a Fiji script written in Python. It takes an open image stack as input and makes a new stack with the sliding maximal Z-projection of the input.


When run, the user is prompted to enter the number of image slices for each maximal Z-Projection, default is 5 image slices. This corresponds to a maximal Z-Projection which is each original image slice +/- 5 image slices.


Raw Stack

Sliding Z-Projection


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Drag and drop '' into your Fiji Plugins folder. Restart Fiji


With an image stack open, select 'bSliding Z Projection' from the plugins menu.

Version History

Nov 3, 2012, initial v1

Dept. of Neuroscience, Linden Lab Johns Hopkins Medicine © 2008-2012